Here is the engine Kubota V3800DI-T and on page 29-30 shows the injectors, but no part # for the injector nozzles. I would take them to Acme Diesel at Knoxville and have them pop tested as they can do it in about 5 minutes free. If you had the part # on the nozzle (they have to come out to get) as those folks can probably match some up to work or fix. Before I pay 4k I would see as that is a rip off. Seems I have had a lot of water in my diesel recently as I have been emptying the water trap on the tractor probably every month as water maybe causing you problems. (I wonder if it is not tank sweat from my storage causing it). Also diesel fuel has very little lube in it now as I always add something whether it helps or not I don't know.
Also I would check at some other dealers on parts prices as some are alot higher than others as I have found out.
https://midtnequipment.com/content/gehl-parts-manuals/Engines/Compact-Track-Loader/CTL85-Compact-Track-Loader-Kubota-V3800DI-T-Engine-Parts-Manual-917328.pdf
https://www.government-fleet.com/297259/kubota-m-series